STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62877.1SusC/RagA family TonB-linked outer membrane protein. (1110 aa)    
Predicted Functional Partners:
EJZ62878.1
Hypothetical protein.
 
     0.933
EJZ62879.1
Hypothetical protein.
 
 
   0.838
EJZ62880.1
Hypothetical protein.
 
     0.792
EJZ62037.1
Hypothetical protein.
 
     0.773
EJZ64643.1
Hypothetical protein.
 
     0.772
EJZ66280.1
Hypothetical protein.
 
     0.770
EJZ62941.1
Hypothetical protein.
 
     0.767
EJZ65933.1
Hypothetical protein.
  
     0.766
EJZ66510.1
Hypothetical protein.
  
     0.766
EJZ62048.1
Hypothetical protein.
  
     0.751
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.