STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62892.1Hypothetical protein; Belongs to the UPF0102 family. (123 aa)    
Predicted Functional Partners:
EJZ62894.1
biotin-[acetyl-CoA-carboxylase] ligase.
       0.791
EJZ62893.1
Hypothetical protein.
       0.782
EJZ61874.1
Mg chelatase-like protein.
 
  
 0.720
EJZ64880.1
Hypothetical protein.
  
    0.539
EJZ63335.1
comF family protein.
 
    0.525
EJZ63299.1
DNA protecting protein DprA.
 
    0.513
EJZ62891.1
Hypothetical protein.
       0.485
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.