STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62926.1Hypothetical protein. (519 aa)    
Predicted Functional Partners:
EJZ62927.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.954
EJZ64642.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.817
EJZ62924.1
Por secretion system C-terminal sorting domain-containing protein.
 
     0.816
EJZ64617.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.813
EJZ62047.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.808
EJZ66509.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.806
EJZ65183.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.801
EJZ62921.1
Hypothetical protein.
 
     0.772
EJZ62942.1
SusC/RagA family TonB-linked outer membrane protein.
  
     0.769
EJZ62941.1
Hypothetical protein.
  
     0.763
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.