STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62966.1Hypothetical protein. (641 aa)    
Predicted Functional Partners:
EJZ62967.1
FeS assembly protein SufB.
       0.727
EJZ62968.1
Hypothetical protein.
       0.727
EJZ62943.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.726
EJZ65417.1
Hypothetical protein.
 
    0.713
EJZ62964.1
FeS assembly protein SufD.
       0.701
EJZ62965.1
FeS assembly ATPase SufC.
       0.701
EJZ62963.1
SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
       0.637
EJZ64939.1
Hypothetical protein.
  
     0.520
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
    
  0.470
EJZ62377.1
Hypothetical protein.
  
     0.428
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.