Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EJZ62389.1 | EJZ62390.1 | HMPREF9448_02508 | HMPREF9448_02509 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.495 |
| EJZ62389.1 | EJZ62391.1 | HMPREF9448_02508 | HMPREF9448_02510 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.495 |
| EJZ62389.1 | EJZ62392.1 | HMPREF9448_02508 | HMPREF9448_02511 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.451 |
| EJZ62389.1 | EJZ62393.1 | HMPREF9448_02508 | HMPREF9448_02512 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.441 |
| EJZ62389.1 | EJZ62734.1 | HMPREF9448_02508 | HMPREF9448_02085 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.432 |
| EJZ62389.1 | EJZ62737.1 | HMPREF9448_02508 | HMPREF9448_02088 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Hypothetical protein. | 0.432 |
| EJZ62389.1 | cas1 | HMPREF9448_02508 | HMPREF9448_02877 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | CRISPR-associated endonuclease cas1, subtype II/nmeni; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. | 0.576 |
| EJZ62389.1 | dnaA | HMPREF9448_02508 | HMPREF9448_01372 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.404 |
| EJZ62389.1 | polA | HMPREF9448_02508 | HMPREF9448_02685 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.419 |
| EJZ62389.1 | rpsT | HMPREF9448_02508 | HMPREF9448_02527 | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 30S ribosomal protein S20; Binds directly to 16S ribosomal RNA. | 0.411 |
| EJZ62390.1 | EJZ62389.1 | HMPREF9448_02509 | HMPREF9448_02508 | Hypothetical protein. | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.495 |
| EJZ62390.1 | EJZ62391.1 | HMPREF9448_02509 | HMPREF9448_02510 | Hypothetical protein. | Hypothetical protein. | 0.871 |
| EJZ62390.1 | EJZ62392.1 | HMPREF9448_02509 | HMPREF9448_02511 | Hypothetical protein. | Hypothetical protein. | 0.790 |
| EJZ62390.1 | EJZ62393.1 | HMPREF9448_02509 | HMPREF9448_02512 | Hypothetical protein. | Hypothetical protein. | 0.734 |
| EJZ62391.1 | EJZ62389.1 | HMPREF9448_02510 | HMPREF9448_02508 | Hypothetical protein. | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.495 |
| EJZ62391.1 | EJZ62390.1 | HMPREF9448_02510 | HMPREF9448_02509 | Hypothetical protein. | Hypothetical protein. | 0.871 |
| EJZ62391.1 | EJZ62392.1 | HMPREF9448_02510 | HMPREF9448_02511 | Hypothetical protein. | Hypothetical protein. | 0.814 |
| EJZ62391.1 | EJZ62393.1 | HMPREF9448_02510 | HMPREF9448_02512 | Hypothetical protein. | Hypothetical protein. | 0.734 |
| EJZ62392.1 | EJZ62389.1 | HMPREF9448_02511 | HMPREF9448_02508 | Hypothetical protein. | Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.451 |
| EJZ62392.1 | EJZ62390.1 | HMPREF9448_02511 | HMPREF9448_02509 | Hypothetical protein. | Hypothetical protein. | 0.790 |
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