STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ61914.1Succinate CoA transferase. (496 aa)    
Predicted Functional Partners:
EJZ66457.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.876
EJZ64951.1
methylmalonyl-CoA mutase, small subunit.
  
 
 0.866
EJZ64952.1
methylmalonyl-CoA mutase large subunit.
  
 
 0.866
EJZ62151.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.730
EJZ62512.1
Hypothetical protein.
  
 0.729
EJZ62823.1
Hypothetical protein.
    
 0.726
EJZ63380.1
Hypothetical protein.
  
 
  0.708
EJZ63952.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.673
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
     
 0.670
EJZ61965.1
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
   
 
 0.663
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.