STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62020.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
EJZ65217.1
Hypothetical protein.
 
     0.750
EJZ64238.1
Hypothetical protein.
  
     0.714
EJZ63161.1
Hypothetical protein.
  
     0.671
EJZ64549.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.658
EJZ62994.1
Hypothetical protein.
  
     0.648
EJZ63337.1
Hypothetical protein.
  
     0.643
EJZ64595.1
Hypothetical protein.
  
    0.641
EJZ64598.1
Hypothetical protein.
 
     0.622
EJZ63253.1
Hypothetical protein.
 
     0.620
EJZ64812.1
Hypothetical protein.
  
    0.601
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.