STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62115.1Hypothetical protein. (196 aa)    
Predicted Functional Partners:
EJZ62112.1
Type I restriction-modification system, M subunit.
 
 
 0.972
EJZ62111.1
HsdR family type I site-specific deoxyribonuclease.
 
  
 0.918
EJZ64781.1
Hypothetical protein.
 
     0.896
EJZ64776.1
Type I restriction-modification system, M subunit.
 
 
 0.892
EJZ64753.1
Type I restriction-modification system, M subunit.
 
 
 0.820
EJZ63235.1
Hypothetical protein.
 
 
 0.788
EJZ62110.1
Hypothetical protein.
  
    0.776
EJZ62113.1
Hypothetical protein.
       0.775
EJZ62114.1
Hypothetical protein.
       0.773
EJZ65392.1
Hypothetical protein.
  
 
 0.750
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.