STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJZ62169.1Hypothetical protein. (759 aa)    
Predicted Functional Partners:
EJZ62170.1
Hypothetical protein.
    
  0.669
EJZ62861.1
Hypothetical protein.
    
  0.656
EJZ66317.1
Hypothetical protein.
  
  
 
0.606
EJZ64581.1
Hypothetical protein.
  
  
  0.570
EJZ66196.1
Hypothetical protein.
  
  
 
0.566
EJZ66195.1
Hypothetical protein.
  
  
 
0.562
EJZ62039.1
Hypothetical protein.
  
  
 
0.537
EJZ62171.1
Hypothetical protein.
   
  0.524
EJZ62168.1
Hypothetical protein.
       0.504
EJZ62172.1
Hypothetical protein.
  
    0.457
Your Current Organism:
Barnesiella intestinihominis
NCBI taxonomy Id: 742726
Other names: B. intestinihominis YIT 11860, Barnesiella intestinihominis YIT 11860, Barnesiella intestinihominis str. YIT 11860, Barnesiella intestinihominis strain YIT 11860
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.