STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU90609.1BF0631 family zinc-dependent metalloproteinase lipoprotein. (440 aa)    
Predicted Functional Partners:
EKU90610.1
Hypothetical protein.
       0.737
EKU90611.1
Hypothetical protein.
       0.642
EKU90612.1
Hypothetical protein.
       0.642
EKU89178.1
Hypothetical protein.
  
     0.626
EKU88267.1
Hypothetical protein; Siimilar to Fibrobacter succinogenes major paralogous domain-containing protein.
  
     0.625
EKU91959.1
Hypothetical protein.
  
     0.606
EKU92020.1
Hypothetical protein.
  
     0.601
EKU87856.1
Hypothetical protein.
 
 
  0.586
EKU88876.1
Hypothetical protein.
  
 
   0.577
EKU89211.1
Hypothetical protein.
  
 
 0.572
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.