STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU90210.1Hypothetical protein. (288 aa)    
Predicted Functional Partners:
EKU92542.1
Chaperone htpG.
   
 0.935
dnaK
Chaperone dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
   
 0.840
EKU90211.1
Hypothetical protein.
 
    
0.840
dinB
DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
  
 
 
 0.746
EKU89847.1
Hypothetical protein.
    
 
 0.724
EKU88430.1
Aspartate kinase.
   
   0.709
EKU91998.1
Hypothetical protein.
    
 
 0.707
cobB
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
       0.669
EKU90209.1
Hypothetical protein.
       0.659
EKU90208.1
Hypothetical protein.
       0.656
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.