STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU89442.1Hypothetical protein. (677 aa)    
Predicted Functional Partners:
EKU89441.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.948
EKU89211.1
Hypothetical protein.
    
  0.773
EKU89718.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.740
EKU87689.1
Hypothetical protein.
  
   0.734
EKU89436.1
Hypothetical protein.
  
     0.731
EKU89440.1
Hypothetical protein.
 
     0.713
EKU90805.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.711
EKU89614.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.695
EKU89290.1
Hypothetical protein.
  
     0.694
EKU89287.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.686
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.