STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU88532.1Hypothetical protein. (506 aa)    
Predicted Functional Partners:
EKU88533.1
SusC/RagA family TonB-linked outer membrane protein.
 
    0.966
EKU88531.1
Hypothetical protein.
   
   0.839
EKU89211.1
Hypothetical protein.
    
  0.773
EKU92602.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.768
EKU91722.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.761
EKU90787.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.749
EKU87822.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.741
EKU90996.1
SusC/RagA family TonB-linked outer membrane protein.
 
 
   0.728
EKU90189.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.726
EKU90241.1
SusC/RagA family TonB-linked outer membrane protein.
  
 
   0.725
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.