STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU88296.1Hypothetical protein. (437 aa)    
Predicted Functional Partners:
EKU88297.1
Hypothetical protein.
 
    0.961
EKU88295.1
Hypothetical protein.
 
     0.956
EKU88301.1
Hypothetical protein.
 
    0.858
EKU88299.1
Hypothetical protein.
 
    0.846
EKU88302.1
Hypothetical protein.
 
    0.833
EKU88300.1
Hypothetical protein.
 
     0.825
EKU88298.1
Hypothetical protein.
  
    0.777
EKU91685.1
Hypothetical protein.
  
     0.715
EKU89898.1
Hypothetical protein.
  
     0.690
EKU88409.1
Hypothetical protein.
  
     0.467
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.