STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU87920.1Hypothetical protein. (307 aa)    
Predicted Functional Partners:
EKU87393.1
Hypothetical protein.
 
     0.949
EKU91497.1
Hypothetical protein.
 
     0.947
EKU87917.1
Hypothetical protein.
 
     0.946
EKU87921.1
Hypothetical protein.
 
   
 0.918
EKU87922.1
Hypothetical protein.
 
     0.893
EKU88694.1
TraG family Bacteroides conjugation system ATPase.
 
  
 0.790
EKU88753.1
TraG family Bacteroides conjugation system ATPase.
 
  
 0.790
EKU87929.1
TraG family Bacteroides conjugation system ATPase.
 
  
 0.790
EKU87381.1
TraG family Bacteroides conjugation system ATPase.
 
  
 0.790
EKU88697.1
Bacteroides conjugative transposon TraJ protein.
 
     0.778
Your Current Organism:
Bacteroides oleiciplenus
NCBI taxonomy Id: 742727
Other names: B. oleiciplenus YIT 12058, Bacteroides oleiciplenus DSM 22535, Bacteroides oleiciplenus JCM 16102, Bacteroides oleiciplenus YIT 12058, Bacteroides oleiciplenus str. YIT 12058, Bacteroides oleiciplenus strain YIT 12058, Bacteroides sp. YIT 12058
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.