STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGX70799.1Hypothetical protein. (294 aa)    
Predicted Functional Partners:
EGX67614.1
Hypothetical protein.
  
     0.565
rplM
50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.
       0.456
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
       0.456
EGX70418.1
Hypothetical protein.
  
     0.426
EGX70795.1
Hypothetical protein.
       0.409
EGX70796.1
Hypothetical protein.
       0.409
EGX70797.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
       0.409
EGX70798.1
Hypothetical protein; Belongs to the ABC transporter superfamily.
       0.409
EGX67242.1
Hypothetical protein.
  
  
  0.407
Your Current Organism:
Collinsella tanakaei
NCBI taxonomy Id: 742742
Other names: C. tanakaei YIT 12063, Collinsella sp. YIT 12063, Collinsella tanakaei JCM 16071, Collinsella tanakaei YIT 12063, Collinsella tanakaei str. YIT 12063, Collinsella tanakaei strain YIT 12063
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.