STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGK00328.1Hypothetical protein. (1012 aa)    
Predicted Functional Partners:
EGK00327.1
Hypothetical protein.
 
     0.941
EGK01148.1
Hypothetical protein.
  
     0.764
EGK02338.1
Hypothetical protein.
  
     0.760
EGK01432.1
Hypothetical protein.
  
     0.754
EGK02221.1
Hypothetical protein.
  
     0.711
EGK01139.1
Hypothetical protein.
  
     0.690
EGK02515.1
Hypothetical protein.
  
     0.667
EGJ99371.1
Hypothetical protein.
  
     0.666
EGK01294.1
Hypothetical protein.
  
     0.665
EGK01219.1
Hypothetical protein.
  
     0.659
Your Current Organism:
Dysgonomonas gadei
NCBI taxonomy Id: 742766
Other names: D. gadei ATCC BAA-286, Dysgonomonas gadei 1145589, Dysgonomonas gadei ATCC BAA-286, Dysgonomonas gadei JCM 16698, Dysgonomonas gadei str. ATCC BAA-286, Dysgonomonas gadei strain ATCC BAA-286
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.