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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP46410.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
EHP47126.1
Hypothetical protein.
  
 
 0.840
EHP48923.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
  
 
 0.792
EHP47129.1
Hypothetical protein; Belongs to the SEDS family.
  
 
 0.792
EHP45654.1
Hypothetical protein.
  
 
 0.792
EHP45164.1
Hypothetical protein.
 
    0.782
EHP46647.1
Hypothetical protein.
  
   
 0.774
EHP46648.1
Hypothetical protein.
  
   
 0.774
EHP45144.1
Hypothetical protein.
  
     0.770
EHP46645.1
Hypothetical protein.
  
     0.737
EHP47553.1
Hypothetical protein.
 
     0.706
Your Current Organism:
Odoribacter laneus
NCBI taxonomy Id: 742817
Other names: O. laneus YIT 12061, Odoribacter laneus JCM 16069, Odoribacter laneus YIT 12061, Odoribacter laneus str. YIT 12061, Odoribacter laneus strain YIT 12061, Odoribacter sp. YIT 12061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.