STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP46410.1Hypothetical protein. (336 aa)    
Predicted Functional Partners:
EHP47126.1
Hypothetical protein.
  
 
 0.813
EHP45164.1
Hypothetical protein.
 
    0.792
EHP46647.1
Hypothetical protein.
  
   
 0.779
EHP46648.1
Hypothetical protein.
  
   
 0.779
EHP45144.1
Hypothetical protein.
  
     0.770
EHP48923.1
Rod shape-determining protein RodA; Belongs to the SEDS family.
  
 0.766
EHP47129.1
Hypothetical protein; Belongs to the SEDS family.
  
 0.766
EHP45654.1
Hypothetical protein.
  
 0.766
EHP46645.1
Hypothetical protein.
  
   
 0.742
EHP47553.1
Hypothetical protein.
 
     0.703
Your Current Organism:
Odoribacter laneus
NCBI taxonomy Id: 742817
Other names: O. laneus YIT 12061, Odoribacter laneus JCM 16069, Odoribacter laneus YIT 12061, Odoribacter laneus str. YIT 12061, Odoribacter laneus strain YIT 12061, Odoribacter sp. YIT 12061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.