STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP46522.1Hypothetical protein. (414 aa)    
Predicted Functional Partners:
EHP46882.1
Hypothetical protein.
 
 
 0.811
EHP46523.1
Hypothetical protein.
       0.767
rnr
Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
       0.657
EHP45130.1
Hypothetical protein.
  
     0.656
EHP46811.1
Hypothetical protein.
 
   
 0.652
EHP48764.1
Hypothetical protein.
 
 
 0.576
EHP47532.1
Hypothetical protein.
 
 
 0.540
EHP46525.1
Hypothetical protein.
       0.429
EHP48724.1
Hypothetical protein.
  
   
 0.428
EHP46804.1
Hypothetical protein.
  
     0.403
Your Current Organism:
Odoribacter laneus
NCBI taxonomy Id: 742817
Other names: O. laneus YIT 12061, Odoribacter laneus JCM 16069, Odoribacter laneus YIT 12061, Odoribacter laneus str. YIT 12061, Odoribacter laneus strain YIT 12061, Odoribacter sp. YIT 12061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.