STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHP46603.1Hypothetical protein. (390 aa)    
Predicted Functional Partners:
EHP46129.1
Outer membrane assembly lipoprotein YfiO.
  
 
 0.790
EHP46604.1
Hypothetical protein.
 
     0.776
EHP50701.1
Hypothetical protein.
 
     0.760
EHP49335.1
Hypothetical protein.
  
 
 0.697
EHP46480.1
Hypothetical protein.
  
 
 0.697
EHP47807.1
Hypothetical protein.
 
   
 0.684
EHP47802.1
Hypothetical protein.
  
 
 
 0.640
EHP48774.1
RIP metalloprotease RseP.
  
  
 0.610
EHP47712.1
Hypothetical protein.
  
     0.568
EHP46602.1
Hypothetical protein.
       0.546
Your Current Organism:
Odoribacter laneus
NCBI taxonomy Id: 742817
Other names: O. laneus YIT 12061, Odoribacter laneus JCM 16069, Odoribacter laneus YIT 12061, Odoribacter laneus str. YIT 12061, Odoribacter laneus strain YIT 12061, Odoribacter sp. YIT 12061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.