Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHP46119.1B558 family succinate dehydrogenase (or fumarate reductase) cytochrome B subunit. (227 aa)    
Predicted Functional Partners:
EHP46120.1
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit.
 
 0.998
EHP46121.1
Succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 0.998
EHP48808.1
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
    
 0.928
argH
Argininosuccinate lyase.
     
  0.701
EHP46780.1
Hypothetical protein.
     
  0.669
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
     
  0.663
EHP50646.1
Hypothetical protein.
    
  0.660
EHP47139.1
Hypothetical protein.
     
 0.651
EHP49911.1
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
     
 0.589
EHP47739.1
1-pyrroline-5-carboxylate dehydrogenase.
     
 0.589
Your Current Organism:
Odoribacter laneus
NCBI taxonomy Id: 742817
Other names: O. laneus YIT 12061, Odoribacter laneus JCM 16069, Odoribacter laneus YIT 12061, Odoribacter laneus str. YIT 12061, Odoribacter laneus strain YIT 12061, Odoribacter sp. YIT 12061
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