STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB30769.1Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family. (415 aa)    
Predicted Functional Partners:
EKB30768.1
Segregation and condensation protein B.
 
  
 0.878
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
 
  
 0.767
cmk
Cytidylate kinase.
 
  
 0.694
EKB31771.1
Exodeoxyribonuclease III (xth).
   
    0.416
EKB30746.1
Exodeoxyribonuclease III.
   
    0.416
Your Current Organism:
Sutterella wadsworthensis 2159BFAA
NCBI taxonomy Id: 742823
Other names: S. wadsworthensis 2_1_59BFAA, Sutterella wadsworthensis 2_1_59BFAA, Sutterella wadsworthensis str. 2_1_59BFAA, Sutterella wadsworthensis strain 2_1_59BFAA
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.