STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM49290.1PFAM: Rhamnan synthesis F; Glycosyl transferase, group 1; KEGG: nmu:Nmul_A2403 glycosyl transferase, group 1. (910 aa)    
Predicted Functional Partners:
AEM49289.1
PFAM: NAD-dependent epimerase/dehydratase; KEGG: bph:Bphy_2297 NAD-dependent epimerase/dehydratase.
 
    0.859
AEM49291.1
KEGG: met:M446_6083 hypothetical protein.
      
0.773
mnmE
tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
    0.769
AEM49286.1
KEGG: aca:ACP_0693 glycosyl transferase, group 2 family; manually curated; PFAM: Glycosyl transferase, family 2.
 
  
 0.717
AEM49287.1
KEGG: afr:AFE_1342 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
     
 0.708
AEM49296.1
PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; KEGG: bph:Bphy_2296 glycosyl transferase family protein.
 
  
 0.707
AEM49288.1
KEGG: eha:Ethha_0741 hypothetical protein.
       0.668
AEM47336.1
KEGG: slt:Slit_2899 glucose-1-phosphate cytidylyltransferase; TIGRFAM: Glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase.
  
 
 0.626
AEM47330.1
PFAM: Glycosyl transferase, family 2; KEGG: met:M446_4968 glycosyl transferase family protein.
 
  
 0.622
AEM49297.1
KEGG: pst:PSPTO_0705 O-antigen ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
 
 0.592
Your Current Organism:
Acidithiobacillus ferrivorans
NCBI taxonomy Id: 743299
Other names: A. ferrivorans SS3, Acidithiobacillus ferrivorans SS3, Acidithiobacillus ferrivorans str. SS3, Acidithiobacillus ferrivorans strain SS3
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