STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD49748.1DNA polymerase. (477 aa)    
Predicted Functional Partners:
SFD49713.1
Putative DNA modification/repair radical SAM protein.
 
     0.966
SFD56445.1
DNA polymerase.
  
  
 
0.919
SFD49786.1
GAF sensor signal transduction histidine kinase.
 
     0.628
SFD49673.1
CreA protein.
       0.540
SFD76720.1
Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.506
SFD99445.1
N6-L-threonylcarbamoyladenine synthase.
  
    0.466
SFE85815.1
Flagellar basal-body rod protein FlgC.
    
   0.432
SFD54511.1
DNA topoisomerase-1.
  
     0.420
SFE20880.1
PAS domain S-box-containing protein.
 
     0.416
SFE44623.1
Circadian clock protein KaiC.
  
     0.409
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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