STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD49965.1Pimeloyl-ACP methyl ester carboxylesterase. (262 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
  0.838
SFD49998.1
sigma-B regulation protein RsbU (phosphoserine phosphatase).
 
    0.761
SFE96471.1
4-carboxymuconolactone decarboxylase.
  
 
 0.734
SFE96426.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
    
 0.572
SFE96449.1
Protocatechuate 3,4-dioxygenase, beta subunit.
    
 0.572
SFE96497.1
P-hydroxybenzoate 3-monooxygenase.
  
 
 0.551
SFE58201.1
3-oxoacid CoA-transferase subunit A.
  
 
 0.534
SFE58163.1
3-oxoacid CoA-transferase subunit B.
  
 
 0.517
SFF09720.1
Acyl carrier protein.
   
  0.517
SFD50027.1
Alcohol dehydrogenase GroES-like domain-containing protein.
   
  0.496
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.