STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD55067.1Transcriptional regulator. (266 aa)    
Predicted Functional Partners:
SFD55144.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.939
SFD55177.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.884
SFD54964.1
Acyl-CoA dehydrogenase.
 
  
  0.874
SFD55111.1
TRAP transporter, DctM subunit.
 
  
  0.872
SFD54886.1
Uncharacterized domain 1-containing protein.
 
     0.866
SFD54919.1
Acyl-CoA dehydrogenase, N-terminal domain.
 
  
  0.835
SFD54999.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.810
SFD54779.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
 
   0.806
SFD55032.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.780
SFD54846.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
    0.739
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.