STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD58389.1DNA-binding transcriptional regulator, GntR family. (229 aa)    
Predicted Functional Partners:
SFD96481.1
DNA-binding transcriptional regulator, FadR family.
  
    0.769
SFE27185.1
Transcriptional regulator, GntR family.
  
     0.768
SFE87605.1
GntR family transcriptional regulator, vanillate catabolism transcriptional regulator.
  
     0.748
SFE75711.1
DNA-binding transcriptional regulator, GntR family.
  
     0.717
SFD88169.1
Transcriptional regulator, GntR family.
  
     0.695
SFF01239.1
Transcriptional regulator, GntR family.
  
    0.620
SFD58365.1
Hypothetical protein.
 
     0.576
SFE79306.1
Transcriptional regulator, GntR family.
  
    0.519
SFD78283.1
Acetolactate synthase, small subunit.
  
    0.454
SFD58415.1
Putative intracellular protease/amidase.
       0.452
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.