SFD46206.1 protein (Sulfitobacter brevis) - STRING interaction network

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Score

SFD46206.1

Heat shock protein Hsp15. (129 aa)

Predicted Functional Partners:

rplS

0.975

rpmB

0.969

rplQ

0.966

rpmD

0.966

rplX

0.966

rpmH

0.965

rpoC

0.963

rplO

0.961

rplR

0.961

rplF

0.961

Your Current Organism:

Sulfitobacter brevis

NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFD46206.1	rplF	SAMN04488523_10147	SAMN04488523_101454	Heat shock protein Hsp15.	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	0.961
SFD46206.1	rplO	SAMN04488523_10147	SAMN04488523_101449	Heat shock protein Hsp15.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.961
SFD46206.1	rplQ	SAMN04488523_10147	SAMN04488523_101443	Heat shock protein Hsp15.	LSU ribosomal protein L17P.	0.966
SFD46206.1	rplR	SAMN04488523_10147	SAMN04488523_101453	Heat shock protein Hsp15.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.961
SFD46206.1	rplS	SAMN04488523_10147	SAMN04488523_110126	Heat shock protein Hsp15.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.975
SFD46206.1	rplX	SAMN04488523_10147	SAMN04488523_101458	Heat shock protein Hsp15.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.966
SFD46206.1	rpmB	SAMN04488523_10147	SAMN04488523_11928	Heat shock protein Hsp15.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.969
SFD46206.1	rpmD	SAMN04488523_10147	SAMN04488523_101451	Heat shock protein Hsp15.	LSU ribosomal protein L30P.	0.966
SFD46206.1	rpmH	SAMN04488523_10147	SAMN04488523_101423	Heat shock protein Hsp15.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.965
SFD46206.1	rpoC	SAMN04488523_10147	SAMN04488523_12311	Heat shock protein Hsp15.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.963
rplF	SFD46206.1	SAMN04488523_101454	SAMN04488523_10147	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	Heat shock protein Hsp15.	0.961
rplF	rplO	SAMN04488523_101454	SAMN04488523_101449	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
rplF	rplQ	SAMN04488523_101454	SAMN04488523_101443	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L17P.	0.999
rplF	rplR	SAMN04488523_101454	SAMN04488523_101453	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
rplF	rplS	SAMN04488523_101454	SAMN04488523_110126	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.998
rplF	rplX	SAMN04488523_101454	SAMN04488523_101458	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.999
rplF	rpmB	SAMN04488523_101454	SAMN04488523_11928	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L28P; Belongs to the bacterial ribosomal protein bL28 family.	0.997
rplF	rpmD	SAMN04488523_101454	SAMN04488523_101451	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L30P.	0.999
rplF	rpmH	SAMN04488523_101454	SAMN04488523_101423	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	LSU ribosomal protein L34P; Belongs to the bacterial ribosomal protein bL34 family.	0.990
rplF	rpoC	SAMN04488523_101454	SAMN04488523_12311	Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999