STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD60709.1Catechol 2,3-dioxygenase. (158 aa)    
Predicted Functional Partners:
SFE78209.1
3-(3-hydroxy-phenyl)propionate hydroxylase.
    
 0.840
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.536
SFD60739.1
Acetoin utilization deacetylase AcuC.
       0.529
SFD60767.1
Nitroreductase.
       0.522
SFD60798.1
Uncharacterized protein involved in cysteine biosynthesis.
       0.522
SFE45209.1
Acyl transferase domain-containing protein.
   
 
 0.509
SFE18997.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
 0.502
SFF23550.1
Cu+-exporting ATPase.
    
  0.487
SFE04950.1
Catechol 2,3-dioxygenase.
 
 
 0.457
SFE96426.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
     
 0.436
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.