SFD72733.1 protein (Sulfitobacter brevis) - STRING interaction network

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Score

SFD72733.1

Uncharacterized metal-binding protein YceD, DUF177 family. (183 aa)

Predicted Functional Partners:

rpsC

0.992

rpmF

0.975

rpsF

0.927

rpsP

0.926

rpsB

0.925

SFE34774.1

0.924

rplK

0.923

rplA

0.922

rplU

0.920

rplJ

0.919

Your Current Organism:

Sulfitobacter brevis

NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFD72733.1	SFE34774.1	SAMN04488523_102198	SAMN04488523_106242	Uncharacterized metal-binding protein YceD, DUF177 family.	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.924
SFD72733.1	rplA	SAMN04488523_102198	SAMN04488523_1237	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.922
SFD72733.1	rplJ	SAMN04488523_102198	SAMN04488523_1238	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.919
SFD72733.1	rplK	SAMN04488523_102198	SAMN04488523_1236	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.923
SFD72733.1	rplU	SAMN04488523_102198	SAMN04488523_11855	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.920
SFD72733.1	rpmF	SAMN04488523_102198	SAMN04488523_102199	Uncharacterized metal-binding protein YceD, DUF177 family.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.975
SFD72733.1	rpsB	SAMN04488523_102198	SAMN04488523_11843	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.925
SFD72733.1	rpsC	SAMN04488523_102198	SAMN04488523_101488	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.992
SFD72733.1	rpsF	SAMN04488523_102198	SAMN04488523_106167	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.927
SFD72733.1	rpsP	SAMN04488523_102198	SAMN04488523_110133	Uncharacterized metal-binding protein YceD, DUF177 family.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.926
SFE34774.1	SFD72733.1	SAMN04488523_106242	SAMN04488523_102198	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Uncharacterized metal-binding protein YceD, DUF177 family.	0.924
SFE34774.1	rplA	SAMN04488523_106242	SAMN04488523_1237	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.964
SFE34774.1	rplJ	SAMN04488523_106242	SAMN04488523_1238	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.949
SFE34774.1	rplK	SAMN04488523_106242	SAMN04488523_1236	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.955
SFE34774.1	rplU	SAMN04488523_106242	SAMN04488523_11855	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.968
SFE34774.1	rpmF	SAMN04488523_106242	SAMN04488523_102199	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L32P; Belongs to the bacterial ribosomal protein bL32 family.	0.946
SFE34774.1	rpsB	SAMN04488523_106242	SAMN04488523_11843	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.	0.996
SFE34774.1	rpsC	SAMN04488523_106242	SAMN04488523_101488	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.996
SFE34774.1	rpsF	SAMN04488523_106242	SAMN04488523_106167	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.	0.995
SFE34774.1	rpsP	SAMN04488523_106242	SAMN04488523_110133	Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family.	0.993