STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD78342.1Cro/C1-type HTH DNA-binding domain-containing protein. (276 aa)    
Predicted Functional Partners:
SFD78309.1
Hypothetical protein.
 
     0.889
SFD73224.1
Hypothetical protein.
  
     0.773
SFE66385.1
Glycosyl transferase family 2.
  
     0.720
SFE65832.1
Hypothetical protein.
  
     0.679
SFD76990.1
Hypothetical protein.
  
     0.621
SFE67681.1
Glycosyl transferase family 2.
  
  
  0.590
SFE79856.1
Hypothetical protein.
  
     0.585
SFF16033.1
Putative rhamnosyl transferase.
  
     0.581
SFE67602.1
Glycosyl transferase family 2.
  
     0.572
SFD72065.1
Acetyltransferase (GNAT) family protein.
  
  
  0.569
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.