STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD69016.1Cysteine desulfuration protein SufE. (135 aa)    
Predicted Functional Partners:
SFE70754.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 0.995
SFD67973.1
Cysteine desulfurase family protein, VC1184 subfamily.
 0.925
SFE12128.1
Selenocysteine lyase/Cysteine desulfurase.
 
 0.902
SFE70549.1
Iron-regulated ABC transporter membrane component SufB.
 
 
 0.901
SFE13388.1
Selenocysteine lyase/Cysteine desulfurase.
  
 0.888
SFE70630.1
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.881
SFE70593.1
Fe-S cluster assembly ATP-binding protein.
 
   0.871
SFD69053.1
Hypothetical protein.
       0.720
SFE75330.1
Selenophosphate synthase.
     
 0.651
SFD54703.1
Reductive dehalogenase.
     
 0.456
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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