STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD88797.1Transcriptional regulator, GntR family. (487 aa)    
Predicted Functional Partners:
SFD88817.1
Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family.
 
    0.821
SFD88923.1
DMSO reductase anchor subunit.
 
   
 0.762
SFD88872.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
    0.684
SFD88723.1
Taurine transport system substrate-binding protein.
 
   
 0.665
SFD88745.1
Taurine-pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.645
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
       0.603
SFD88679.1
Taurine transport system permease protein.
  
   
 0.594
SFD88898.1
Fe-S-cluster-containing dehydrogenase component.
 
     0.529
SFF05840.1
2-aminoadipate transaminase.
  
  
 
0.499
SFD89513.1
Hypothetical protein.
  
  
 
0.475
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.