STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD89055.1Glycine oxidase. (343 aa)    
Predicted Functional Partners:
SFD47497.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.975
SFE95874.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.975
SFD89030.1
tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmC.
 
     0.790
SFD89003.1
Permease of the drug/metabolite transporter (DMT) superfamily.
       0.734
SFE18577.1
Glutamate synthase (NADPH) large subunit.
  
 
 0.719
SFE91420.1
Hypothetical protein.
  
     0.652
SFE31335.1
Hypothetical protein.
  
     0.635
SFD56998.1
Hypothetical protein.
  
     0.630
SFE42970.1
Hypothetical protein.
  
     0.603
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.575
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.