STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD84074.1(S)-ureidoglycine aminohydrolase. (269 aa)    
Predicted Functional Partners:
SFD84042.1
Ureidoglycolate lyase.
 
  
  0.995
SFD84105.1
OHCU decarboxylase.
 
     0.917
SFD84017.1
Uncharacterized membrane protein.
 
     0.812
SFF30459.1
Uncharacterized oxidoreductase; Belongs to the LDH2/MDH2 oxidoreductase family.
    
 0.735
SFD84130.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.645
SFD51197.1
N-carbamoyl-L-amino-acid hydrolase.
 
 
 0.641
SFF06380.1
N-carbamoyl-L-amino-acid hydrolase.
 
 
 0.631
SFD83737.1
N-carbamoyl-L-amino-acid hydrolase.
  
 
 0.567
SFE90801.1
(2R)-3-sulfolactate dehydrogenase (NADP+); Belongs to the LDH2/MDH2 oxidoreductase family.
 
  
 0.531
SFE27073.1
Aspartate aminotransferase.
 
  
  0.465
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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