STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutHHistidine ammonia-lyase. (512 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.999
hutI
Imidazolonepropionase.
 
  
 0.998
SFD97579.1
Formiminoglutamase.
 
  
 0.949
SFD97503.1
Formiminoglutamate deiminase.
 
  
 0.878
SFD97641.1
Transcriptional regulator, GntR family.
 
  
 0.833
SFD89885.1
Aromatic amino acid aminotransferase apoenzyme.
   
 
  0.811
SFD53499.1
Prephenate dehydrogenase.
     
 0.805
SFD71933.1
Agmatinase; Belongs to the arginase family.
  
  
 0.729
SFD77547.1
Arginase; Belongs to the arginase family.
  
  
 0.705
SFE45209.1
Acyl transferase domain-containing protein.
    
 0.698
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.