STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE02347.1Outer membrane protein OmpA. (191 aa)    
Predicted Functional Partners:
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.907
SFE02311.1
Hypothetical protein.
 
    
0.845
SFE25589.1
Putative peptidoglycan binding domain-containing protein.
 
    0.705
SFE04199.1
Sporulation related domain-containing protein.
  
     0.652
SFD86723.1
Hypothetical protein.
  
     0.635
SFE01506.1
Hint domain-containing protein.
  
 
  0.627
SFE66521.1
Hint domain-containing protein.
  
 
  0.626
SFE14345.1
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
  0.610
SFE57921.1
Outer membrane protein OmpA.
  
     0.602
SFD86746.1
Hypothetical protein.
  
     0.570
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.