Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD74481.1 | SFD95719.1 | SAMN04488523_102250 | SAMN04488523_10426 | Predicted dithiol-disulfide isomerase, DsbA family. | Hemoglobin. | 0.485 |
SFD87846.1 | SFD87880.1 | SAMN04488523_103197 | SAMN04488523_103198 | Cobalt transporter subunit CbtA. | Cobalt transporter subunit CbtB. | 0.983 |
SFD87846.1 | SFD95719.1 | SAMN04488523_103197 | SAMN04488523_10426 | Cobalt transporter subunit CbtA. | Hemoglobin. | 0.512 |
SFD87880.1 | SFD87846.1 | SAMN04488523_103198 | SAMN04488523_103197 | Cobalt transporter subunit CbtB. | Cobalt transporter subunit CbtA. | 0.983 |
SFD87880.1 | SFD95719.1 | SAMN04488523_103198 | SAMN04488523_10426 | Cobalt transporter subunit CbtB. | Hemoglobin. | 0.541 |
SFD95670.1 | SFD95693.1 | SAMN04488523_10424 | SAMN04488523_10425 | Transcriptional regulator, BadM/Rrf2 family. | Hypothetical protein. | 0.635 |
SFD95670.1 | SFD95719.1 | SAMN04488523_10424 | SAMN04488523_10426 | Transcriptional regulator, BadM/Rrf2 family. | Hemoglobin. | 0.732 |
SFD95693.1 | SFD95670.1 | SAMN04488523_10425 | SAMN04488523_10424 | Hypothetical protein. | Transcriptional regulator, BadM/Rrf2 family. | 0.635 |
SFD95693.1 | SFD95719.1 | SAMN04488523_10425 | SAMN04488523_10426 | Hypothetical protein. | Hemoglobin. | 0.818 |
SFD95719.1 | SFD74481.1 | SAMN04488523_10426 | SAMN04488523_102250 | Hemoglobin. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.485 |
SFD95719.1 | SFD87846.1 | SAMN04488523_10426 | SAMN04488523_103197 | Hemoglobin. | Cobalt transporter subunit CbtA. | 0.512 |
SFD95719.1 | SFD87880.1 | SAMN04488523_10426 | SAMN04488523_103198 | Hemoglobin. | Cobalt transporter subunit CbtB. | 0.541 |
SFD95719.1 | SFD95670.1 | SAMN04488523_10426 | SAMN04488523_10424 | Hemoglobin. | Transcriptional regulator, BadM/Rrf2 family. | 0.732 |
SFD95719.1 | SFD95693.1 | SAMN04488523_10426 | SAMN04488523_10425 | Hemoglobin. | Hypothetical protein. | 0.818 |
SFD95719.1 | SFE10515.1 | SAMN04488523_10426 | SAMN04488523_10515 | Hemoglobin. | Predicted dithiol-disulfide isomerase, DsbA family. | 0.485 |
SFD95719.1 | SFE20880.1 | SAMN04488523_10426 | SAMN04488523_105319 | Hemoglobin. | PAS domain S-box-containing protein. | 0.487 |
SFD95719.1 | SFE80693.1 | SAMN04488523_10426 | SAMN04488523_110184 | Hemoglobin. | Major Facilitator Superfamily protein. | 0.403 |
SFD95719.1 | SFF07937.1 | SAMN04488523_10426 | SAMN04488523_11729 | Hemoglobin. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.813 |
SFD95719.1 | SFF26256.1 | SAMN04488523_10426 | SAMN04488523_1426 | Hemoglobin. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.900 |
SFE10515.1 | SFD95719.1 | SAMN04488523_10515 | SAMN04488523_10426 | Predicted dithiol-disulfide isomerase, DsbA family. | Hemoglobin. | 0.485 |
page 1 of 2