STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD95895.1GntR family transcriptional regulator. (280 aa)    
Predicted Functional Partners:
SFD95868.1
2-Methylisocitrate lyase, PEP mutase family.
 
     0.821
SFD95919.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
     0.595
SFE01764.1
N-acetylglucosamine 6-phosphate deacetylase.
 
  
 0.566
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
 
   
 0.548
SFE75235.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.541
SFF26536.1
Transcriptional regulator, XRE family with cupin sensor.
  
  
 0.541
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.500
SFF01239.1
Transcriptional regulator, GntR family.
  
    0.449
SFE04587.1
Cupin domain protein.
  
    0.428
SFE18043.1
Cupin domain protein.
  
    0.428
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.