STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD96061.1Pimeloyl-ACP methyl ester carboxylesterase. (411 aa)    
Predicted Functional Partners:
SFD96096.1
4-carboxymuconolactone decarboxylase.
 
  
  0.860
SFD96037.1
Glyoxylase, beta-lactamase superfamily II.
 
     0.827
SFD96077.1
3-hydroxyisobutyrate dehydrogenase.
    
  0.791
SFD96122.1
DNA-binding transcriptional regulator, GntR family.
 
     0.769
SFD96147.1
Branched-chain amino acid transport system substrate-binding protein.
 
  
  0.683
SFD96197.1
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
  0.530
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
  0.517
SFF09720.1
Acyl carrier protein.
   
  0.517
SFE99883.1
4-carboxymuconolactone decarboxylase.
  
  
  0.486
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.482
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.