STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE12443.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (533 aa)    
Predicted Functional Partners:
SFE12368.1
Peptide/nickel transport system permease protein.
 
 
  0.906
SFE12401.1
Peptide/nickel transport system permease protein.
 
  0.905
SFE12483.1
Acetyltransferase (GNAT) family protein.
       0.773
SFE76541.1
Biotin transport system permease protein.
  
 0.738
SFE59561.1
Peptide/nickel transport system permease protein.
 
 
  0.701
SFE77235.1
Microcin C transport system permease protein.
  
  0.685
SFE12512.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
     0.640
SFE88515.1
Peptide/nickel transport system permease protein.
 
 
  0.591
SFF01358.1
Peptide/nickel transport system permease protein.
 
 
  0.591
SFE12544.1
D-aminopeptidase.
       0.570
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.