STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE13146.1Kynurenine formamidase. (263 aa)    
Predicted Functional Partners:
SFE12994.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
  
  0.957
SFE13028.1
Indolepyruvate ferredoxin oxidoreductase alpha subunit.
 
     0.949
SFE13063.1
DNA-binding transcriptional regulator, MarR family.
 
     0.939
SFE29359.1
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.
  
 
 0.927
SFE13107.1
Phytoene dehydrogenase-related protein.
 
     0.917
SFE13388.1
Selenocysteine lyase/Cysteine desulfurase.
 
  0.897
SFE13185.1
Phytoene dehydrogenase-related protein.
 
     0.800
kynA
Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.
  
 
 0.781
SFE13221.1
Peptide/nickel transport system substrate-binding protein.
 
     0.780
SFE13258.1
Peptide/nickel transport system permease protein.
 
     0.630
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.