STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE29026.12-dehydro-3-deoxygalactonokinase. (294 aa)    
Predicted Functional Partners:
SFE03051.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
 
 0.920
SFE01571.1
2-keto-3-deoxy-phosphogluconate aldolase.
    
 0.640
SFE99968.1
L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
 
 0.569
SFE29153.1
Transcriptional regulator, MarR family.
  
    0.521
SFE29071.1
anthraniloyl-CoA monooxygenase.
       0.520
SFE29114.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
       0.520
SFE29194.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.520
SFD71006.1
Aldose 1-epimerase.
 
     0.501
SFE28985.1
Cobaltochelatase CobS subunit.
       0.471
SFE75888.1
L-alanine-DL-glutamate epimerase.
  
 
 0.439
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.