STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE25836.1Alkane 1-monooxygenase. (337 aa)    
Predicted Functional Partners:
SFD85924.1
Alkane 1-monooxygenase.
  
  
 
0.912
SFE25796.1
Hypothetical protein.
       0.691
SFD68532.1
Hypothetical protein.
  
     0.685
SFF02461.1
Phthalate 4,5-dioxygenase reductase subunit.
 
 
 0.677
SFE25876.1
Formate dehydrogenase.
    
  0.649
SFD89256.1
2,4-dienoyl-CoA reductase (NADPH2).
  
   
 0.645
SFD54703.1
Reductive dehalogenase.
  
 
 0.618
SFE17819.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
 0.618
SFD68505.1
Cytochrome P450.
 
  
  0.617
SFD47114.1
Capsular polysaccharide export protein.
  
     0.609
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.