STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE43561.1EcsC protein family protein. (254 aa)    
Predicted Functional Partners:
SFE43594.1
Predicted N-acetyltransferase YhbS.
       0.770
SFE43638.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
       0.612
SFD85702.1
Hypothetical protein.
  
     0.578
SFE33446.1
AsmA-like C-terminal region.
  
     0.547
SFE66385.1
Glycosyl transferase family 2.
  
     0.498
SFD67887.1
Hypothetical protein.
  
     0.495
SFE58503.1
Hypothetical protein.
  
     0.488
SFD76990.1
Hypothetical protein.
  
     0.472
SFD78309.1
Hypothetical protein.
  
     0.471
SFD78716.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.461
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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