STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE51594.1MerR family transcriptional regulator, mercuric resistance operon regulatory protein. (135 aa)    
Predicted Functional Partners:
SFF26256.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.948
rpoD
RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
   
 
 0.922
SFD54104.1
Transcriptional regulator, MerR family.
  
     0.722
SFE20880.1
PAS domain S-box-containing protein.
   
 0.715
SFF09476.1
GAF domain-containing protein.
    
 0.708
SFE18577.1
Glutamate synthase (NADPH) large subunit.
    
 0.654
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.606
SFE51561.1
Small multidrug resistance family-3 protein.
       0.588
SFE51518.1
MerR family transcriptional regulator, mercuric resistance operon regulatory protein.
 
 
  
0.573
SFF11443.1
DNA-binding transcriptional regulator, MerR family.
  
     0.567
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.