STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE54175.1Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (305 aa)    
Predicted Functional Partners:
SFE54221.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
   0.783
SFE54256.1
3-hydroxyisobutyrate dehydrogenase.
    
  0.750
ilvD-2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
    
  0.742
SFE04367.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.738
SFE15714.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 0.738
SFD97432.1
FAD/FMN-containing dehydrogenase.
   
 0.639
SFE60022.1
FAD/FMN-containing dehydrogenase.
   
 0.639
SFE05129.1
Glyoxylate/hydroxypyruvate reductase A.
 
  
 
0.619
SFE33092.1
Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.600
SFE69507.1
Hydroxypyruvate reductase.
 
 
 0.591
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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