STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE69539.1Metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family. (237 aa)    
Predicted Functional Partners:
SFE69580.1
Cardiolipin synthetase 2.
 
 
  0.946
SFD67973.1
Cysteine desulfurase family protein, VC1184 subfamily.
    
   0.902
SFE13388.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.902
SFE12128.1
Selenocysteine lyase/Cysteine desulfurase.
    
   0.902
SFE70754.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
    
   0.902
SFE84836.1
Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase.
 
 
  0.737
SFE69613.1
Trimethylamine---corrinoid protein Co-methyltransferase; Belongs to the trimethylamine methyltransferase family.
       0.496
SFE44404.1
Uncharacterized NAD(P)/FAD-binding protein YdhS.
   
    0.443
SFE67193.1
Membrane protein required for colicin V production.
  
    0.440
SFE14563.1
Diacylglycerol kinase family enzyme.
   
 
  0.409
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.