Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFD48982.1 | SFD50621.1 | SAMN04488523_101131 | SAMN04488523_101183 | Capsular polysaccharide transport system permease protein. | Pectate lyase superfamily protein. | 0.715 |
SFD48982.1 | SFD52126.1 | SAMN04488523_101131 | SAMN04488523_101230 | Capsular polysaccharide transport system permease protein. | Hint domain-containing protein. | 0.481 |
SFD48982.1 | SFD86723.1 | SAMN04488523_101131 | SAMN04488523_103151 | Capsular polysaccharide transport system permease protein. | Hypothetical protein. | 0.723 |
SFD48982.1 | SFE17405.1 | SAMN04488523_101131 | SAMN04488523_105218 | Capsular polysaccharide transport system permease protein. | Glycosyl transferase family 2. | 0.784 |
SFD48982.1 | SFE17438.1 | SAMN04488523_101131 | SAMN04488523_105219 | Capsular polysaccharide transport system permease protein. | Core-2/I-Branching enzyme. | 0.766 |
SFD48982.1 | SFE17470.1 | SAMN04488523_101131 | SAMN04488523_105220 | Capsular polysaccharide transport system permease protein. | Hypothetical protein. | 0.766 |
SFD48982.1 | SFE66521.1 | SAMN04488523_101131 | SAMN04488523_10993 | Capsular polysaccharide transport system permease protein. | Hint domain-containing protein. | 0.727 |
SFD50621.1 | SFD48982.1 | SAMN04488523_101183 | SAMN04488523_101131 | Pectate lyase superfamily protein. | Capsular polysaccharide transport system permease protein. | 0.715 |
SFD50621.1 | SFD52126.1 | SAMN04488523_101183 | SAMN04488523_101230 | Pectate lyase superfamily protein. | Hint domain-containing protein. | 0.721 |
SFD50621.1 | SFD86723.1 | SAMN04488523_101183 | SAMN04488523_103151 | Pectate lyase superfamily protein. | Hypothetical protein. | 0.609 |
SFD50621.1 | SFE17405.1 | SAMN04488523_101183 | SAMN04488523_105218 | Pectate lyase superfamily protein. | Glycosyl transferase family 2. | 0.725 |
SFD50621.1 | SFE17438.1 | SAMN04488523_101183 | SAMN04488523_105219 | Pectate lyase superfamily protein. | Core-2/I-Branching enzyme. | 0.740 |
SFD50621.1 | SFE17470.1 | SAMN04488523_101183 | SAMN04488523_105220 | Pectate lyase superfamily protein. | Hypothetical protein. | 0.735 |
SFD50621.1 | SFE25589.1 | SAMN04488523_101183 | SAMN04488523_10624 | Pectate lyase superfamily protein. | Putative peptidoglycan binding domain-containing protein. | 0.436 |
SFD50621.1 | SFE66521.1 | SAMN04488523_101183 | SAMN04488523_10993 | Pectate lyase superfamily protein. | Hint domain-containing protein. | 0.783 |
SFD52126.1 | SFD48982.1 | SAMN04488523_101230 | SAMN04488523_101131 | Hint domain-containing protein. | Capsular polysaccharide transport system permease protein. | 0.481 |
SFD52126.1 | SFD50621.1 | SAMN04488523_101230 | SAMN04488523_101183 | Hint domain-containing protein. | Pectate lyase superfamily protein. | 0.721 |
SFD52126.1 | SFD86723.1 | SAMN04488523_101230 | SAMN04488523_103151 | Hint domain-containing protein. | Hypothetical protein. | 0.647 |
SFD52126.1 | SFD90753.1 | SAMN04488523_101230 | SAMN04488523_103313 | Hint domain-containing protein. | Hypothetical protein. | 0.430 |
SFD52126.1 | SFE17405.1 | SAMN04488523_101230 | SAMN04488523_105218 | Hint domain-containing protein. | Glycosyl transferase family 2. | 0.487 |
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