STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE81529.1Hypoxia induced protein conserved region. (68 aa)    
Predicted Functional Partners:
SFE81495.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
  
    0.865
SFE81564.1
Short-chain dehydrogenase.
       0.760
SFE26473.1
Hypothetical protein.
  
     0.707
SFE81427.1
Electron transfer flavoprotein alpha subunit apoprotein.
       0.661
SFE81464.1
Electron transfer flavoprotein beta subunit.
       0.657
SFE45692.1
Protein of unknown function.
  
     0.604
SFE27800.1
Hypothetical protein.
  
     0.541
SFE27423.1
Uncharacterized membrane protein.
  
     0.540
SFD56823.1
Hypothetical protein.
  
     0.499
SFD74638.1
Hypothetical protein.
  
     0.498
Your Current Organism:
Sulfitobacter brevis
NCBI taxonomy Id: 74348
Other names: ATCC BAA-4, DSM 11443, JCM 21790, S. brevis, Sulfitobacter brevis Labrenz et al. 2000, strain EL-162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.